Gene detail information of Glyur006279s00045441.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06279 | 123 | 1519 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K18857 | ADH1 | EC:1.1.1.1 | Glycolysis / Gluconeogenesis | map00010 |
| Fatty acid degradation | map00071 | |||
| alpha-Linolenic acid metabolism | map00592 | |||
| Tyrosine metabolism | map00350 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.748 |
| SRR1783600 | control | 0.720 |
| SRR1783602 | moderate drought stress | 2.950 |
| SRR1811619 | moderate drought stress | 2.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.525 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.857 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.163 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.163 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.103 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.257 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.628 |
| SRR2967015 | Control (Tissue:root) | 0.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.667 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.343 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.116 |
| SRR8400027 | Control-Root | 0.295 |