Gene detail information of Glyur006371s00045842.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19230.2 | 6.00E-39 | Riboflavin synthase-like superfamily protein |
| NR | XP_004488139.1 | 2.34E-80 | PREDICTED: respiratory burst oxidase homolog protein E-like isoform X2 [Cicer arietinum] |
| COG | YP_007146260.1 | 4.00E-11 | putative ferric reductase [Cylindrospermum stagnale PCC 7417] |
| Swissprot | tr|O81211|RBOHE_ARATH | 7.00E-44 | Respiratory burst oxidase homolog protein E |
| trEMBL | tr|I1L1T9|I1L1T9_SOYBN | 7.00E-78 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G08470.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06371 | 456 | 2640 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13447 | RBOH | EC:1.6.3.- 1.11.1.- | MAPK signaling pathway - plant | map04016 |
| Plant-pathogen interaction | map04626 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006371s00045842.1 | PF08022.7 | FAD_binding_8 | 1 | 72 | 1.20E-13 |
| Glyur006371s00045842.1 | PF08030.7 | NAD_binding_6 | 79 | 106 | 3.40E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.318 |
| SRR1783600 | control | 4.255 |
| SRR1783602 | moderate drought stress | 2.133 |
| SRR1811619 | moderate drought stress | 2.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.633 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.597 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.234 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.462 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.952 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.813 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.756 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.006 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.769 |
| SRR2967015 | Control (Tissue:root) | 1.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.727 |
| SRR9715740 | Leave | 0.362 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.730 |
| SRR9715742 | Root | 2.489 |
| SRR9715743 | Root | 1.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.143 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.013 |
| SRR8749032 | Uninduced | 0.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.435 |
| SRR8400027 | Control-Root | 8.276 |