Gene detail information of Glyur006376s00042199.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G48730.10glutamate-1-semialdehyde 2,1-aminomutase 2
NRXP_003522589.10PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Glycine max]
COGYP_007109169.10glutamate-1-semialdehyde 2,1-aminomutase [Geitlerinema sp. PCC 7407]
Swissprottr|P45621|GSA_SOYBN0Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic (Precursor)
trEMBLtr|I1JSD2|I1JSD2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G00420.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0637626874964-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01845hemL EC:5.4.3.8 Porphyrin and chlorophyll metabolism map00860


Gene Ontology

biological_process

GO:0033014  tetrapyrrole biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0008483  transaminase activity

GO:0030170  pyridoxal phosphate binding

GO:0042286  glutamate-1-semialdehyde 2,1-aminomutase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006376s00042199.1PF00202.16Aminotran_3803801.60E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control41.947
SRR1783600control40.609
SRR1783602moderate drought stress23.993
SRR1811619moderate drought stress23.590

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.738
DRR006520Root Summer glycyrrhizin high producing strain26.529
DRR006521Root Winter glycyrrhizin high producing strain15.075
DRR006522Root Winter glycyrrhizin high producing strain14.302
DRR006523Root Summer glycyrrhizin low producing strain28.829
DRR006524Root Summer glycyrrhizin low producing strain29.230
DRR006525Leaf Summer glycyrrhizin high producing strain81.054
DRR006526Leaf Summer glycyrrhizin high producing strain80.105

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)64.075
SRR2868004Drought Stress(Tissue:root)52.567
SRR2967015Control (Tissue:root)52.055

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave103.824
SRR9715740Leave75.987
SRR9715741Leave65.697
SRR9715739Root64.760
SRR9715742Root40.525
SRR9715743Root45.331

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h52.905
SRR8749028MeJA induced 9h32.372
SRR8749029MeJA induced 9h25.905
SRR8749030Uninduced25.097
SRR8749031Uninduced16.893
SRR8749032Uninduced20.010

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root68.755
SRR8400027Control-Root69.925

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved