Gene detail information of Glyur006437s00045222.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23180.18.00E-85cysteine-rich RLK (RECEPTOR-like protein kinase) 10
NRKHN02668.13.49E-131Cysteine-rich receptor-like protein kinase 29 [Glycine soja]
COGYP_001958461.17.00E-22hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q8GYA4|CRK10_ARATH2.00E-100Cysteine-rich receptor-like protein kinase 10 (Precursor)
trEMBLtr|V7BBE5|V7BBE5_PHAVU3.00E-130Uncharacterized protein {ECO:0000313|EMBL:ESW15197.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0643733595088+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006437s00045222.1PF00069.20Pkinase181811.60E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.064
SRR1783600control0.075
SRR1783602moderate drought stress0.046
SRR1811619moderate drought stress0.043

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.364
DRR006520Root Summer glycyrrhizin high producing strain0.747
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.296
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.234
DRR006526Leaf Summer glycyrrhizin high producing strain0.057

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.379
SRR2868004Drought Stress(Tissue:root)6.649
SRR2967015Control (Tissue:root)2.082

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.337
SRR9715740Leave3.044
SRR9715741Leave3.335
SRR9715739Root0.521
SRR9715742Root0.083
SRR9715743Root0.522

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.821
SRR8749028MeJA induced 9h2.004
SRR8749029MeJA induced 9h2.236
SRR8749030Uninduced6.117
SRR8749031Uninduced12.921
SRR8749032Uninduced2.264

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.809
SRR8400027Control-Root0.652

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved