Gene detail information of Glyur006540s00047451.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30360.11.00E-138SOS3-interacting protein 4
NRKEH34441.10CBL-interacting kinase [Medicago truncatula]
COGYP_007468874.13.00E-35serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprottr|O22932|CIPKB_ARATH0CBL-interacting serine/threonine-protein kinase 11
trEMBLtr|A0A072UYE6|A0A072UYE6_MEDTR0CBL-interacting kinase {ECO:0000313|EMBL:KEH34441.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold065409212222-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006540s00047451.1PF00069.20Pkinase172715.30E-69
Glyur006540s00047451.1PF03822.9NAF3033566.20E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.456
SRR1783600control3.617
SRR1783602moderate drought stress3.760
SRR1811619moderate drought stress3.861

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.419
DRR006520Root Summer glycyrrhizin high producing strain6.385
DRR006521Root Winter glycyrrhizin high producing strain1.113
DRR006522Root Winter glycyrrhizin high producing strain0.980
DRR006523Root Summer glycyrrhizin low producing strain3.719
DRR006524Root Summer glycyrrhizin low producing strain3.912
DRR006525Leaf Summer glycyrrhizin high producing strain4.554
DRR006526Leaf Summer glycyrrhizin high producing strain4.570

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.627
SRR2868004Drought Stress(Tissue:root)6.021
SRR2967015Control (Tissue:root)5.497

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.980
SRR9715740Leave15.703
SRR9715741Leave36.881
SRR9715739Root4.676
SRR9715742Root9.133
SRR9715743Root7.776

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.112
SRR8749028MeJA induced 9h0.454
SRR8749029MeJA induced 9h0.580
SRR8749030Uninduced0.193
SRR8749031Uninduced0.057
SRR8749032Uninduced0.232

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.167
SRR8400027Control-Root9.613

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved