Gene detail information of Glyur006546s00047656.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15550.1 | 2.00E-120 | indole-3-acetate beta-D-glucosyltransferase |
| NR | XP_004502258.1 | 0 | PREDICTED: UDP-glycosyltransferase 75D1-like [Cicer arietinum] |
| COG | YP_007421411.1 | 4.00E-13 | Glycosyltransferase, MGT [Bacillus thuringiensis serovar kurstaki str. HD73] |
| Swissprot | tr|F8WKW0|UGT1_GARJA | 0 | Crocetin glucosyltransferase, chloroplastic (Precursor) |
| trEMBL | tr|A0A067XTY8|A0A067XTY8_CICAR | 0 | UDP-glycosyltransferase {ECO:0000313|EMBL:AGU14117.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06546 | 3276 | 4706 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006546s00047656.1 | PF00201.13 | UDPGT | 269 | 409 | 3.80E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.082 |
| SRR1783600 | control | 10.357 |
| SRR1783602 | moderate drought stress | 9.544 |
| SRR1811619 | moderate drought stress | 9.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.139 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.941 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.413 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.456 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.078 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.452 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 72.366 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 71.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.326 |
| SRR2868004 | Drought Stress(Tissue:root) | 23.778 |
| SRR2967015 | Control (Tissue:root) | 15.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 92.120 |
| SRR9715740 | Leave | 158.296 |
| SRR9715741 | Leave | 105.784 |
| SRR9715739 | Root | 35.633 |
| SRR9715742 | Root | 7.596 |
| SRR9715743 | Root | 13.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 76.187 |
| SRR8749028 | MeJA induced 9h | 146.939 |
| SRR8749029 | MeJA induced 9h | 98.906 |
| SRR8749030 | Uninduced | 50.794 |
| SRR8749031 | Uninduced | 39.301 |
| SRR8749032 | Uninduced | 26.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.289 |
| SRR8400027 | Control-Root | 12.993 |