Gene detail information of Glyur006571s00047023.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13180.12.00E-17NAC domain containing protein 83
NRNP_001238078.16.91E-26NAC domain protein [Glycine max]
Swissprottr|Q8GY42|NAC25_ARATH2.00E-13NAC transcription factor 25
trEMBLtr|B2ZGQ7|B2ZGQ7_SOYBN3.00E-26Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G53954.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0657122823296-


Gene family

Gene familysubfamily
Transcription Factors FamilyNAC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006571s00047023.1PF02365.10NAM14508.10E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.342
SRR1783600control21.608
SRR1783602moderate drought stress69.238
SRR1811619moderate drought stress70.411

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain43.824
DRR006520Root Summer glycyrrhizin high producing strain43.766
DRR006521Root Winter glycyrrhizin high producing strain35.110
DRR006522Root Winter glycyrrhizin high producing strain34.291
DRR006523Root Summer glycyrrhizin low producing strain83.703
DRR006524Root Summer glycyrrhizin low producing strain88.791
DRR006525Leaf Summer glycyrrhizin high producing strain96.350
DRR006526Leaf Summer glycyrrhizin high producing strain95.409

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)86.299
SRR2868004Drought Stress(Tissue:root)118.124
SRR2967015Control (Tissue:root)104.359

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave62.978
SRR9715740Leave97.077
SRR9715741Leave53.933
SRR9715739Root69.343
SRR9715742Root41.718
SRR9715743Root48.373

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h50.643
SRR8749028MeJA induced 9h70.945
SRR8749029MeJA induced 9h43.267
SRR8749030Uninduced109.326
SRR8749031Uninduced31.775
SRR8749032Uninduced51.198

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root114.491
SRR8400027Control-Root134.635

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved