Gene detail information of Glyur006639s00046810.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10360.1 | 3.00E-24 | glutathione S-transferase TAU 18 |
| NR | XP_003628561.1 | 1.05E-45 | Glutathione S-transferase [Medicago truncatula] |
| COG | YP_007172684.1 | 3.00E-07 | glutathione S-transferase [Dactylococcopsis salina PCC 8305] |
| Swissprot | tr|Q9FUS9|GSTUI_ARATH | 4.00E-33 | Glutathione S-transferase U18 |
| trEMBL | tr|G7LDS9|G7LDS9_MEDTR | 4.00E-46 | Glutathione S-transferase, amino-terminal domain protein {ECO:0000313|EMBL:AET03037.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06639 | 996 | 5192 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006639s00046810.1 | PF13417.1 | GST_N_3 | 12 | 69 | 1.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.359 |
| SRR1783600 | control | 1.285 |
| SRR1783602 | moderate drought stress | 0.335 |
| SRR1811619 | moderate drought stress | 0.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.177 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.213 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.147 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.635 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.864 |
| SRR2967015 | Control (Tissue:root) | 7.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.205 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.209 |
| SRR9715739 | Root | 0.022 |
| SRR9715742 | Root | 0.122 |
| SRR9715743 | Root | 0.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.170 |
| SRR8749030 | Uninduced | 0.179 |
| SRR8749031 | Uninduced | 0.122 |
| SRR8749032 | Uninduced | 0.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.222 |
| SRR8400027 | Control-Root | 2.084 |