Gene detail

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Gene detail information of Glyur006647s00045158.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G58110.2	9.00E-25	Basic-leucine zipper (bZIP) transcription factor family protein
NR	AES68260.2	4.46E-61	hypothetical protein MTR_3g005230 [Medicago truncatula]
Swissprot	tr\|F4IN23\|BZP34_ARATH	2.00E-22	Basic leucine zipper 34
trEMBL	tr\|G7IYC8\|G7IYC8_MEDTR	2.00E-61	Uncharacterized protein {ECO:0000313\|EMBL:AES68260.2}

Sequence

Transcript Sequence

>Glyur006647s00045158.1
ATGCAGGATATGGAAACTAGTTCAAATAAAAACTTGAGAAATCACTCTCAATTACAGTACACAGGAGCAGTACCGCTTCCATTGCCCCCTAAAAGTAGTACATTCTCTGAATTAGCTCATGAATGTAGTTCTGAATTAGGATTAATAATGTCATCGGAGCCCAAACGGCGCCATCATCAACGTACATATTCGGATAGCCTGGTAACTGATCAGGAAGTTGTACCGTCTTGGTTGAAAGAACTGCTTGATGATGAGCCTGCAGAGGCAGAGGCGGACACGCCTCTATGCAGCAGGAGGAGTCATCGACGATCATCAAGTGACTCCATCTCCATAGCATACTTACAATTACAAAAAACAGCTGAAATTAGGAAGGAATATCAGACCACTGGCACGAGCAGCAGCAGTACTAGTAACAGTACTACTCCATCAGTATCACCCCCTACGAGTACTTATGTTACAGTCACTCCCCAGGAGGCAGATCATCATCATCATCATCATCATGCCACACAAATATCAGACATGTTTGATAGTGAACAAATTAATAATGTACCAGACCCCTTTCGTCGTTGCTTACATTCCAATCCTGCTTCCGCAACCAGAACAGACTCAAAACGTGTCAAAAGGCATTCAGCTCAGCAATACCGGGCCAGGAAAGTTCAATACATTGGGGAGTTAGAAAGAAGTATCCAAGTTTTACAGGCAGAAGGATATGAAGTATCAGCGGAGCTTGAATTTCTTGATCAGCAAAACCTGATACTGGGTATGGAGAACAGGGCCCTCAAACAACGGTTGGACAGTTTATCCCAAGTGCAGTTCATCAAATGCTTGGAGCAGGAAATGCTTGAGAGAGAAATCACAAGGCTTCGACACCTTTATCAACAACAACAACACAAACAGCAGCAGAAGCATCATGGTAGGCAGCATCGATCTAATAAACGTCAAGATAATCTTGATTCCTCATTTGCCAAACTCTCTTTGAAAAATAATAAGGGAACCGAATCGCAGAAAGCCAGATAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold06647	1223	2840	-

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur006647s00045158.1	PF00170.16	bZIP_1	208	257	4.00E-05

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.185
SRR1783600	control	7.094
SRR1783602	moderate drought stress	5.362
SRR1811619	moderate drought stress	4.836

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	1.451
DRR006522	Root Winter glycyrrhizin high producing strain	1.248
DRR006523	Root Summer glycyrrhizin low producing strain	0.107
DRR006524	Root Summer glycyrrhizin low producing strain	0.108
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.615
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.626

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.535
SRR2868004	Drought Stress(Tissue:root)	2.221
SRR2967015	Control (Tissue:root)	2.188

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	2.507
SRR9715740	Leave	1.708
SRR9715741	Leave	2.388
SRR9715739	Root	0.049
SRR9715742	Root	0.392
SRR9715743	Root	0.320

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.669
SRR8749028	MeJA induced 9h	1.090
SRR8749029	MeJA induced 9h	3.010
SRR8749030	Uninduced	1.867
SRR8749031	Uninduced	0.817
SRR8749032	Uninduced	3.030

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	3.487
SRR8400027	Control-Root	1.092