Gene detail information of Glyur006651s00042888.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G01220.12.00E-144sulfoquinovosyldiacylglycerol 2
NRXP_004506782.10PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Cicer arietinum]
COGYP_007124156.12.00E-77glycosyltransferase [Microcoleus sp. PCC 7113]
trEMBLtr|V7AK62|V7AK62_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW05934.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0665115184802-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K06119SQD2 EC:2.4.1.- Glycerolipid metabolism map00561


Gene Ontology

biological_process

GO:0009058  biosynthetic process



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006651s00042888.1PF00534.15Glycos_transf_11142674.50E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.249
SRR1783600control14.481
SRR1783602moderate drought stress9.273
SRR1811619moderate drought stress9.399

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.417
DRR006520Root Summer glycyrrhizin high producing strain8.025
DRR006521Root Winter glycyrrhizin high producing strain3.961
DRR006522Root Winter glycyrrhizin high producing strain3.791
DRR006523Root Summer glycyrrhizin low producing strain11.383
DRR006524Root Summer glycyrrhizin low producing strain12.463
DRR006525Leaf Summer glycyrrhizin high producing strain14.188
DRR006526Leaf Summer glycyrrhizin high producing strain14.411

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)82.650
SRR2868004Drought Stress(Tissue:root)47.924
SRR2967015Control (Tissue:root)60.047

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.853
SRR9715740Leave18.452
SRR9715741Leave21.747
SRR9715739Root11.665
SRR9715742Root21.538
SRR9715743Root21.209

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.113
SRR8749028MeJA induced 9h8.292
SRR8749029MeJA induced 9h4.950
SRR8749030Uninduced3.513
SRR8749031Uninduced1.366
SRR8749032Uninduced2.669

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root51.908
SRR8400027Control-Root85.625

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved