Gene detail information of Glyur006837s00042764.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38180.1 | 5.00E-49 | FAR1-related sequence 5 |
| NR | XP_006591712.1 | 8.14E-82 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max] |
| Swissprot | tr|Q9SZL8|FRS5_ARATH | 3.00E-52 | Protein FAR1-RELATED SEQUENCE 5 |
| trEMBL | tr|K7L283|K7L283_SOYBN | 2.00E-95 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G25623.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06837 | 64 | 3954 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006837s00042764.1 | PF03101.10 | FAR1 | 210 | 299 | 2.00E-17 |
| Glyur006837s00042764.1 | PF10551.4 | MULE | 363 | 453 | 3.80E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.543 |
| SRR1783600 | control | 21.501 |
| SRR1783602 | moderate drought stress | 24.049 |
| SRR1811619 | moderate drought stress | 23.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 52.611 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 52.185 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 65.748 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 64.758 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.907 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.506 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.764 |
| SRR2967015 | Control (Tissue:root) | 3.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.807 |
| SRR9715740 | Leave | 8.208 |
| SRR9715741 | Leave | 16.622 |
| SRR9715739 | Root | 1.684 |
| SRR9715742 | Root | 16.486 |
| SRR9715743 | Root | 17.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.006 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.920 |
| SRR8400027 | Control-Root | 8.956 |