Gene detail information of Glyur006904s00047323.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G64940.13.00E-139cytochrome P450, family 87, subfamily A, polypeptide 6
NRXP_003628670.10Cytochrome P450 [Medicago truncatula]
COGYP_003199705.15.00E-22cytochrome P450 [Nakamurella multipartita DSM 44233]
Swissprottr|Q9SRQ1|C89A9_ARATH4.00E-157Cytochrome P450 89A9
trEMBLtr|G7LFG7|G7LFG7_MEDTR0Cytochrome P450 family protein {ECO:0000313|EMBL:AET03146.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0690429264440+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP89A6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006904s00047323.1PF00067.17p450325004.50E-91


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.000
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain2.262
DRR006526Leaf Summer glycyrrhizin high producing strain2.129

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.159
SRR2868004Drought Stress(Tissue:root)0.126
SRR2967015Control (Tissue:root)0.100

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.459
SRR9715740Leave3.092
SRR9715741Leave1.571
SRR9715739Root0.000
SRR9715742Root0.000
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.039
SRR8749031Uninduced0.167
SRR8749032Uninduced0.205

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.019
SRR8400027Control-Root0.068