Gene detail information of Glyur006904s00047323.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT1G64940.1 | 3.00E-139 | cytochrome P450, family 87, subfamily A, polypeptide 6 |
NR | XP_003628670.1 | 0 | Cytochrome P450 [Medicago truncatula] |
COG | YP_003199705.1 | 5.00E-22 | cytochrome P450 [Nakamurella multipartita DSM 44233] |
Swissprot | tr|Q9SRQ1|C89A9_ARATH | 4.00E-157 | Cytochrome P450 89A9 |
trEMBL | tr|G7LFG7|G7LFG7_MEDTR | 0 | Cytochrome P450 family protein {ECO:0000313|EMBL:AET03146.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold06904 | 2926 | 4440 | + |
Gene family
Gene family | subfamily |
---|---|
Cytochrome P450 Family | CYP89A6 |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
-- | -- | -- | -- | -- |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur006904s00047323.1 | PF00067.17 | p450 | 32 | 500 | 4.50E-91 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 0.000 |
SRR1783600 | control | 0.000 |
SRR1783602 | moderate drought stress | 0.000 |
SRR1811619 | moderate drought stress | 0.000 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.262 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.129 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 0.159 |
SRR2868004 | Drought Stress(Tissue:root) | 0.126 |
SRR2967015 | Control (Tissue:root) | 0.100 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 2.459 |
SRR9715740 | Leave | 3.092 |
SRR9715741 | Leave | 1.571 |
SRR9715739 | Root | 0.000 |
SRR9715742 | Root | 0.000 |
SRR9715743 | Root | 0.000 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 0.000 |
SRR8749028 | MeJA induced 9h | 0.000 |
SRR8749029 | MeJA induced 9h | 0.000 |
SRR8749030 | Uninduced | 0.039 |
SRR8749031 | Uninduced | 0.167 |
SRR8749032 | Uninduced | 0.205 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 0.019 |
SRR8400027 | Control-Root | 0.068 |