Gene detail

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Gene detail information of Glyur007003s00046206.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G56400.1	2.00E-20	WRKY DNA-binding protein 70
NR	XP_003544261.1	1.16E-72	PREDICTED: probable WRKY transcription factor 70-like [Glycine max]
Swissprot	tr\|Q9LY00\|WRK70_ARATH	2.00E-40	Probable WRKY transcription factor 70
trEMBL	tr\|K7M7W5\|K7M7W5_SOYBN	4.00E-73	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G36430.2}

Sequence

Transcript Sequence

>Glyur007003s00046206.1
CGCATTCATTTGTTTGGTCATTTCTTTTCTATTTCTATATTCCAAACGAAGTGTCCTTTTCTTCTCTCTCCCACTTCCCACATTCCAGCCAGCGCTTCCCAGACGGACCTGTGGCTAAAACAATTACAAAAGGGGATGACAGAGAGAGTGAGAGAGAGAAAGAGAGAAAAAAACAGAACAACAAACACAAAGAAAAGCATTCCCAAGAAAATTAGCCAAACAGATCCTGAGAGAGAAAAAATGGATATCCATCNTTGCCCTGAGAGTGGGAGCAAGAAGAGAGTGATAGTCAAAGAGCTTGTTGAGGGGCAAGAAGCTGCTACCCAACTCAAGTTTCTGCTCGAGAATCCCTTTGGAGGTGCTGATGCTGATTCCTCTTCTCTCTCCTTAGCGGAACTCGTCGCCAATGTGCTCAGATCTTTCACGGAAGCCCTTTCTATTATCACCTCTTATCAGAGTAATAATAATCTGCTGAATTCTTCCGGCGAAAATGGGTCGCCGGTGACCGGAGATTCCACCAGTGACAAAAGGAAGAGATCCATGCCACCGGCCAGAAAAGGTGGGAGAGGATGCTACAAAAGAAGGAAGAGTGCAGAGACATGGACCACAGTTTCCCACACCACCCATGATAATCATGCATGGAGGAAGTATGGACAGAAGGAAATCCTGAATTCTGAATTCCCCAGGAGTTACTTTAGGTGCACATATAAGTATGATGAAGGTTGCTCCGCAAGAAAACAGGTGCAGCAGACAAAAGAGAATCCAGATATGTACCAAACTATGTACATTGGCATTAAAAAAAGCAAAGCCACCCCTAAGGCTAAGGCAACAACAACACATGATCATGATTTGGTCAAAAAAACTAGCAGCAGTACTTGTTGGGAATCATATCTTGAAACTGAGGTACTACCACNAAAAAAAATACAGGATCACAATATTAGCTCATCAACAAGCCTAGCTATAAAACAAGAATATAAAAAAAAAGAACACACCCCAAATGATCACAAGCCCTTAAAGATGGAATCTGATATTGATAAAAAAATGTATAATTCATCATCTACAGGCTCTGATAAATGTCTGGTAATGGATTTTGGGAAAAAAACTGTTCATTTCTGCACTGACTTATTCCACTTTGATGAAAGTCAGTTGATGGGAATTTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold07003	280	4241	-

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur007003s00046206.1	PF03106.10	WRKY	164	220	2.30E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.201
SRR1783600	control	1.318
SRR1783602	moderate drought stress	0.836
SRR1811619	moderate drought stress	0.900

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.839
DRR006520	Root Summer glycyrrhizin high producing strain	0.275
DRR006521	Root Winter glycyrrhizin high producing strain	0.213
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.094
DRR006524	Root Summer glycyrrhizin low producing strain	0.093
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.353
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.702

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.288
SRR2868004	Drought Stress(Tissue:root)	0.168
SRR2967015	Control (Tissue:root)	0.549

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	3.267
SRR9715740	Leave	4.577
SRR9715741	Leave	6.779
SRR9715739	Root	0.043
SRR9715742	Root	1.048
SRR9715743	Root	0.992

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.086
SRR8400027	Control-Root	0.075