Gene detail information of Glyur007013s00044282.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G54960.19.00E-64pyruvate decarboxylase-2
NRXP_003542972.11.31E-100PREDICTED: pyruvate decarboxylase 1-like [Glycine max]
COGYP_001834435.12.00E-31thiamine pyrophosphate binding domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039]
Swissprottr|P51850|PDC1_PEA3.00E-96Pyruvate decarboxylase 1
trEMBLtr|I1M1V9|I1M1V9_SOYBN2.00E-101Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G30490.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0701313184321-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01568PDC, pdc EC:4.1.1.1 Glycolysis / Gluconeogenesis map00010


Gene Ontology

molecular_function

GO:0030976  thiamine pyrophosphate binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007013s00044282.1PF02776.13TPP_enzyme_N311042.00E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.219
SRR1783600control1.487
SRR1783602moderate drought stress1.612
SRR1811619moderate drought stress2.537

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.508
DRR006520Root Summer glycyrrhizin high producing strain1.059
DRR006521Root Winter glycyrrhizin high producing strain3.375
DRR006522Root Winter glycyrrhizin high producing strain2.589
DRR006523Root Summer glycyrrhizin low producing strain2.633
DRR006524Root Summer glycyrrhizin low producing strain2.075
DRR006525Leaf Summer glycyrrhizin high producing strain0.064
DRR006526Leaf Summer glycyrrhizin high producing strain0.259

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.160
SRR2868004Drought Stress(Tissue:root)0.358
SRR2967015Control (Tissue:root)0.317

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.055
SRR9715740Leave0.150
SRR9715741Leave0.083
SRR9715739Root0.057
SRR9715742Root0.036
SRR9715743Root0.153

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.209
SRR8749028MeJA induced 9h1.833
SRR8749029MeJA induced 9h0.998
SRR8749030Uninduced0.287
SRR8749031Uninduced0.689
SRR8749032Uninduced7.958

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.304
SRR8400027Control-Root0.229

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved