Gene detail information of Glyur007298s00047264.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G64660.11.00E-67methionine gamma-lyase
NRXP_004495508.12.90E-117PREDICTED: methionine gamma-lyase-like [Cicer arietinum]
COGYP_001194478.13.00E-41cystathionine gamma-synthase [Flavobacterium johnsoniae UW101]
Swissprottr|Q9SGU9|MGL_ARATH5.00E-85Methionine gamma-lyase
trEMBLtr|A0A072VNE2|A0A072VNE2_MEDTR9.00E-106Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:KEH42908.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0729827843358-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01761E4.4.1.11 EC:4.4.1.11 Cysteine and methionine metabolism map00270
Selenocompound metabolismmap00450


Gene Ontology

molecular_function

GO:0003824  catalytic activity

GO:0030170  pyridoxal phosphate binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007298s00047264.1PF01053.15Cys_Met_Meta_PP101523.00E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.795
SRR1783600control8.371
SRR1783602moderate drought stress33.872
SRR1811619moderate drought stress31.964

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain40.506
DRR006520Root Summer glycyrrhizin high producing strain38.481
DRR006521Root Winter glycyrrhizin high producing strain108.266
DRR006522Root Winter glycyrrhizin high producing strain109.137
DRR006523Root Summer glycyrrhizin low producing strain18.994
DRR006524Root Summer glycyrrhizin low producing strain20.578
DRR006525Leaf Summer glycyrrhizin high producing strain48.410
DRR006526Leaf Summer glycyrrhizin high producing strain48.816

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.647
SRR2868004Drought Stress(Tissue:root)53.969
SRR2967015Control (Tissue:root)87.161

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave172.464
SRR9715740Leave116.948
SRR9715741Leave191.018
SRR9715739Root87.354
SRR9715742Root68.846
SRR9715743Root71.568

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.576
SRR8749028MeJA induced 9h11.132
SRR8749029MeJA induced 9h22.333
SRR8749030Uninduced12.075
SRR8749031Uninduced19.710
SRR8749032Uninduced39.837

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.774
SRR8400027Control-Root23.652

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved