Gene detail information of Glyur007488s00043616.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G35550.11.00E-46WUSCHEL related homeobox 13
NRXP_004492096.12.08E-103PREDICTED: WUSCHEL-related homeobox 13-like isoform X1 [Cicer arietinum]
Swissprottr|O81788|WOX13_ARATH2.00E-56WUSCHEL-related homeobox 13
trEMBLtr|K7MVC2|K7MVC2_SOYBN1.00E-102Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G52491.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0748823674184+


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007488s00043616.1PF00046.24Homeobox17775.00E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.991
SRR1783600control14.122
SRR1783602moderate drought stress15.068
SRR1811619moderate drought stress14.690

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.573
DRR006520Root Summer glycyrrhizin high producing strain25.769
DRR006521Root Winter glycyrrhizin high producing strain19.853
DRR006522Root Winter glycyrrhizin high producing strain19.590
DRR006523Root Summer glycyrrhizin low producing strain17.733
DRR006524Root Summer glycyrrhizin low producing strain18.324
DRR006525Leaf Summer glycyrrhizin high producing strain6.141
DRR006526Leaf Summer glycyrrhizin high producing strain7.983

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.928
SRR2868004Drought Stress(Tissue:root)10.433
SRR2967015Control (Tissue:root)13.922

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.649
SRR9715740Leave9.901
SRR9715741Leave13.531
SRR9715739Root10.519
SRR9715742Root8.661
SRR9715743Root9.334

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h49.280
SRR8749028MeJA induced 9h10.677
SRR8749029MeJA induced 9h35.899
SRR8749030Uninduced9.439
SRR8749031Uninduced15.262
SRR8749032Uninduced14.983

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.375
SRR8400027Control-Root17.137

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved