Gene detail information of Glyur007502s00042768.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24503.11.00E-158aldehyde dehydrogenase 2C4
NRXP_007152818.10hypothetical protein PHAVU_004G162300g [Phaseolus vulgaris]
COGYP_007058635.15.00E-138NAD-dependent aldehyde dehydrogenase [Rivularia sp. PCC 7116]
Swissprottr|Q56YU0|AL2C4_ARATH0Aldehyde dehydrogenase family 2 member C4
trEMBLtr|V7C3S3|V7C3S3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW24812.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold07502692587+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12355REF1 EC:1.2.1.68 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007502s00042768.1PF00171.17Aldedh23368.20E-143


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.882
SRR1783600control1.889
SRR1783602moderate drought stress2.618
SRR1811619moderate drought stress2.609

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.741
DRR006520Root Summer glycyrrhizin high producing strain1.812
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.442
DRR006524Root Summer glycyrrhizin low producing strain0.323
DRR006525Leaf Summer glycyrrhizin high producing strain2.862
DRR006526Leaf Summer glycyrrhizin high producing strain2.659

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.290
SRR2868004Drought Stress(Tissue:root)17.408
SRR2967015Control (Tissue:root)14.809

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.426
SRR9715740Leave1.836
SRR9715741Leave4.578
SRR9715739Root0.395
SRR9715742Root1.265
SRR9715743Root1.177

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.484
SRR8749028MeJA induced 9h11.624
SRR8749029MeJA induced 9h3.407
SRR8749030Uninduced94.003
SRR8749031Uninduced51.202
SRR8749032Uninduced27.687

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.576
SRR8400027Control-Root12.556

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved