Gene detail information of Glyur007526s00046545.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45580.13.00E-20cytochrome P450, family 76, subfamily C, polypeptide 3
NRAFK46798.12.91E-71unknown [Medicago truncatula]
Swissprottr|Q8VWZ7|C76B6_CATRO1.00E-39Geraniol 8-hydroxylase
trEMBLtr|I3T2Q6|I3T2Q6_MEDTR1.00E-71Uncharacterized protein {ECO:0000313|EMBL:AFK46798.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold075267253621-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP76C3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007526s00046545.1PF00067.17p450421562.30E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.106
SRR1783600control1.298
SRR1783602moderate drought stress0.527
SRR1811619moderate drought stress0.500

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.287
DRR006520Root Summer glycyrrhizin high producing strain0.172
DRR006521Root Winter glycyrrhizin high producing strain10.314
DRR006522Root Winter glycyrrhizin high producing strain9.627
DRR006523Root Summer glycyrrhizin low producing strain0.076
DRR006524Root Summer glycyrrhizin low producing strain0.291
DRR006525Leaf Summer glycyrrhizin high producing strain3.897
DRR006526Leaf Summer glycyrrhizin high producing strain3.600

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.519
SRR2868004Drought Stress(Tissue:root)5.131
SRR2967015Control (Tissue:root)2.535

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.958
SRR9715740Leave4.089
SRR9715741Leave22.111
SRR9715739Root1.138
SRR9715742Root4.805
SRR9715743Root3.258

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.586
SRR8749028MeJA induced 9h5.753
SRR8749029MeJA induced 9h0.582
SRR8749030Uninduced2.646
SRR8749031Uninduced9.167
SRR8749032Uninduced1.406

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.493
SRR8400027Control-Root4.723

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved