Gene detail information of Glyur007544s00046844.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G36570.14.00E-97Leucine-rich repeat protein kinase family protein
NRXP_003554412.10PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-like [Glycine max]
COGYP_004775215.11.00E-17RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9C9Y8|Y3868_ARATH3.00E-87Probable inactive receptor kinase At3g08680 (Precursor)
trEMBLtr|I1NAH8|I1NAH8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G37430.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0754419843900-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007544s00046844.1PF12799.2LRR_4901304.10E-07
Glyur007544s00046844.1PF00560.28LRR_11391600.17
Glyur007544s00046844.1PF07714.12Pkinase_Tyr3744562.80E-11
Glyur007544s00046844.1PF07714.12Pkinase_Tyr4635351.00E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.566
SRR1783600control16.943
SRR1783602moderate drought stress15.926
SRR1811619moderate drought stress15.622

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain76.697
DRR006520Root Summer glycyrrhizin high producing strain74.236
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain36.181
DRR006524Root Summer glycyrrhizin low producing strain36.522
DRR006525Leaf Summer glycyrrhizin high producing strain2.086
DRR006526Leaf Summer glycyrrhizin high producing strain2.195

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)54.121
SRR2868004Drought Stress(Tissue:root)31.332
SRR2967015Control (Tissue:root)42.242

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.920
SRR9715740Leave0.000
SRR9715741Leave0.584
SRR9715739Root13.523
SRR9715742Root9.430
SRR9715743Root9.884

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.147
SRR8749028MeJA induced 9h0.594
SRR8749029MeJA induced 9h0.471
SRR8749030Uninduced0.015
SRR8749031Uninduced0.000
SRR8749032Uninduced0.188

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root52.225
SRR8400027Control-Root97.065

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved