Gene detail information of Glyur007579s00046034.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G37790.17.00E-40Homeobox-leucine zipper protein family
NRXP_003543728.11.79E-86PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max]
Swissprottr|P46604|HAT22_ARATH3.00E-49Homeobox-leucine zipper protein HAT22
trEMBLtr|I1LVK0|I1LVK0_SOYBN7.00E-87Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G00310.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0757920063588-


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007579s00046034.1PF00046.24Homeobox831378.60E-16
Glyur007579s00046034.1PF02183.13HALZ1391744.30E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.577
SRR1783600control6.305
SRR1783602moderate drought stress4.058
SRR1811619moderate drought stress4.222

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.082
DRR006520Root Summer glycyrrhizin high producing strain1.051
DRR006521Root Winter glycyrrhizin high producing strain5.771
DRR006522Root Winter glycyrrhizin high producing strain5.338
DRR006523Root Summer glycyrrhizin low producing strain0.335
DRR006524Root Summer glycyrrhizin low producing strain0.361
DRR006525Leaf Summer glycyrrhizin high producing strain2.832
DRR006526Leaf Summer glycyrrhizin high producing strain2.716

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.346
SRR2868004Drought Stress(Tissue:root)5.578
SRR2967015Control (Tissue:root)6.230

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.019
SRR9715740Leave3.852
SRR9715741Leave2.946
SRR9715739Root0.248
SRR9715742Root4.135
SRR9715743Root3.111

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.758
SRR8749028MeJA induced 9h53.491
SRR8749029MeJA induced 9h23.362
SRR8749030Uninduced69.484
SRR8749031Uninduced82.207
SRR8749032Uninduced65.289

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.012
SRR8400027Control-Root8.598

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved