Gene detail information of Glyur007740s00046748.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38280.22.00E-38AMP deaminase, putative / myoadenylate deaminase, putative
NRXP_004506727.16.73E-45PREDICTED: AMP deaminase-like isoform X1 [Cicer arietinum]
Swissprottr|O80452|AMPD_ARATH2.00E-44AMP deaminase
trEMBLtr|V7ANC7|V7ANC7_PHAVU3.00E-45Uncharacterized protein {ECO:0000313|EMBL:ESW06805.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold077407242056-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01490AMPD EC:3.5.4.6 Purine metabolism map00230


Gene Ontology

biological_process

GO:0032264  IMP salvage


molecular_function

GO:0003876  AMP deaminase activity

GO:0019239  deaminase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007740s00046748.1PF00962.17A_deaminase27781.30E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.410
SRR1783600control12.447
SRR1783602moderate drought stress19.823
SRR1811619moderate drought stress17.212

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.392
DRR006520Root Summer glycyrrhizin high producing strain9.655
DRR006521Root Winter glycyrrhizin high producing strain14.161
DRR006522Root Winter glycyrrhizin high producing strain14.754
DRR006523Root Summer glycyrrhizin low producing strain10.807
DRR006524Root Summer glycyrrhizin low producing strain9.550
DRR006525Leaf Summer glycyrrhizin high producing strain4.930
DRR006526Leaf Summer glycyrrhizin high producing strain4.466

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.620
SRR2868004Drought Stress(Tissue:root)2.130
SRR2967015Control (Tissue:root)4.043

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.000
SRR9715740Leave0.118
SRR9715741Leave0.000
SRR9715739Root0.000
SRR9715742Root1.307
SRR9715743Root0.003

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.289
SRR8749028MeJA induced 9h0.142
SRR8749029MeJA induced 9h0.045
SRR8749030Uninduced0.045
SRR8749031Uninduced0.000
SRR8749032Uninduced2.203

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.404
SRR8400027Control-Root0.264

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved