Gene detail information of Glyur007785s00045198.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G43430.1 | 1.00E-80 | glyoxalase 2-1 |
| NR | XP_003541152.1 | 8.97E-139 | PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast isoform X1 [Glycine max] |
| COG | YP_002299601.1 | 5.00E-49 | glyoxalase II [Rhodospirillum centenum SW] |
| Swissprot | tr|O24495|GLO2M_ARATH | 1.00E-118 | Hydroxyacylglutathione hydrolase 1, mitochondrial (Precursor) |
| trEMBL | tr|I1LQC6|I1LQC6_SOYBN | 3.00E-139 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G05470.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07785 | 99 | 2918 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01069 | E3.1.2.6, gloB | EC:3.1.2.6 | Pyruvate metabolism | map00620 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007785s00045198.1 | PF00753.22 | Lactamase_B | 88 | 222 | 6.80E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.085 |
| SRR1783600 | control | 45.292 |
| SRR1783602 | moderate drought stress | 20.607 |
| SRR1811619 | moderate drought stress | 19.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.401 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.352 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.727 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.560 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.193 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.310 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.359 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 31.979 |
| SRR2868004 | Drought Stress(Tissue:root) | 27.401 |
| SRR2967015 | Control (Tissue:root) | 26.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.252 |
| SRR9715740 | Leave | 6.697 |
| SRR9715741 | Leave | 3.722 |
| SRR9715739 | Root | 15.622 |
| SRR9715742 | Root | 24.803 |
| SRR9715743 | Root | 15.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.923 |
| SRR8749028 | MeJA induced 9h | 33.658 |
| SRR8749029 | MeJA induced 9h | 22.727 |
| SRR8749030 | Uninduced | 8.103 |
| SRR8749031 | Uninduced | 4.061 |
| SRR8749032 | Uninduced | 6.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 55.063 |
| SRR8400027 | Control-Root | 49.707 |