Gene detail information of Glyur007820s00045750.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05260.16.00E-98Peroxidase superfamily protein
NRKEH29649.11.81E-176peroxidase family protein [Medicago truncatula]
Swissprottr|O23044|PER3_ARATH7.00E-121Peroxidase 3 (Precursor)
trEMBLtr|A0A072UIQ7|A0A072UIQ7_MEDTR7.00E-177Peroxidase family protein {ECO:0000313|EMBL:KEH29649.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0782015373395+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007820s00045750.1PF00141.18peroxidase681681.30E-32
Glyur007820s00045750.1PF00141.18peroxidase1682663.40E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.312
SRR1783600control3.748
SRR1783602moderate drought stress2.248
SRR1811619moderate drought stress2.382

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.008
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.099
DRR006524Root Summer glycyrrhizin low producing strain0.099
DRR006525Leaf Summer glycyrrhizin high producing strain17.773
DRR006526Leaf Summer glycyrrhizin high producing strain18.414

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)94.040
SRR2868004Drought Stress(Tissue:root)63.853
SRR2967015Control (Tissue:root)54.046

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.545
SRR9715740Leave0.407
SRR9715741Leave0.753
SRR9715739Root0.923
SRR9715742Root0.210
SRR9715743Root0.319

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.701
SRR8749028MeJA induced 9h1.300
SRR8749029MeJA induced 9h1.630
SRR8749030Uninduced0.563
SRR8749031Uninduced1.596
SRR8749032Uninduced0.758

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.705
SRR8400027Control-Root7.857

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved