Gene detail information of Glyur007831s00046371.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G17770.19.00E-33trehalose phosphatase/synthase 5
NRAFK35421.19.89E-57unknown [Lotus japonicus]
COGYP_005007956.14.00E-07trehalose 6-phosphatase, trehalose 6-phosphate synthase [Niastella koreensis GR20-10]
Swissprottr|O23617|TPS5_ARATH4.00E-37Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
trEMBLtr|I3S579|I3S579_LOTJA4.00E-57Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold078313338+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007831s00046371.1PF02358.11Trehalose_PPase8874.30E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.189
SRR1783600control14.631
SRR1783602moderate drought stress8.737
SRR1811619moderate drought stress8.845

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.100
DRR006520Root Summer glycyrrhizin high producing strain23.031
DRR006521Root Winter glycyrrhizin high producing strain5.470
DRR006522Root Winter glycyrrhizin high producing strain6.808
DRR006523Root Summer glycyrrhizin low producing strain29.686
DRR006524Root Summer glycyrrhizin low producing strain31.618
DRR006525Leaf Summer glycyrrhizin high producing strain9.811
DRR006526Leaf Summer glycyrrhizin high producing strain9.587

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.183
SRR2868004Drought Stress(Tissue:root)17.367
SRR2967015Control (Tissue:root)14.865

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.174
SRR9715740Leave9.721
SRR9715741Leave8.237
SRR9715739Root9.022
SRR9715742Root14.544
SRR9715743Root14.286

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.560
SRR8749028MeJA induced 9h0.343
SRR8749029MeJA induced 9h1.277
SRR8749030Uninduced0.073
SRR8749031Uninduced0.132
SRR8749032Uninduced0.306

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.710
SRR8400027Control-Root41.051

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved