Gene detail information of Glyur007914s00046619.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G20950.1 | 2.00E-37 | Phosphofructokinase family protein |
| NR | XP_004498196.1 | 1.12E-49 | PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q41140|PFPA_RICCO | 1.00E-44 | Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha {ECO:0000255|HAMAP-Rule:MF_03185} |
| trEMBL | tr|V7C6Y0|V7C6Y0_PHAVU | 1.00E-48 | Uncharacterized protein {ECO:0000313|EMBL:ESW25128.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07914 | 50 | 1301 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00895 | pfp, PFP | EC:2.7.1.90 | Glycolysis / Gluconeogenesis | map00010 |
| Pentose phosphate pathway | map00030 | |||
| Fructose and mannose metabolism | map00051 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.925 |
| SRR1783600 | control | 35.472 |
| SRR1783602 | moderate drought stress | 17.379 |
| SRR1811619 | moderate drought stress | 17.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.455 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.658 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.576 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 37.532 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.495 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.125 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.579 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 115.219 |
| SRR2868004 | Drought Stress(Tissue:root) | 73.032 |
| SRR2967015 | Control (Tissue:root) | 62.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 69.738 |
| SRR9715740 | Leave | 58.499 |
| SRR9715741 | Leave | 51.578 |
| SRR9715739 | Root | 42.339 |
| SRR9715742 | Root | 55.052 |
| SRR9715743 | Root | 49.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 71.031 |
| SRR8749028 | MeJA induced 9h | 71.259 |
| SRR8749029 | MeJA induced 9h | 240.685 |
| SRR8749030 | Uninduced | 45.060 |
| SRR8749031 | Uninduced | 225.304 |
| SRR8749032 | Uninduced | 390.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 90.935 |
| SRR8400027 | Control-Root | 100.371 |