Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur007940s00043989.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G33730.1	3.00E-58	cytochrome P450, family 76, subfamily C, polypeptide 5
NR	KHN20459.1	8.36E-105	Cytochrome P450 76C2 [Glycine soja]
COG	YP_003265754.1	3.00E-25	cytochrome P450 [Haliangium ochraceum DSM 14365]
Swissprot	tr\|Q8VWZ7\|C76B6_CATRO	7.00E-69	Geraniol 8-hydroxylase
trEMBL	tr\|K7MU14\|K7MU14_SOYBN	1.00E-104	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G45520.2}

Sequence

Transcript Sequence

>Glyur007940s00043989.1
ATGGCAGAGCTACTACGTAACCCTGATAAATTAACAAAAGTAAGAAAAGAGTTGTGTCAAGCAATTGGCAAAGATGAAACACTTGAAGAATCACACATTTCCAAGTTGCCTTTTTTACAAGCAGTGGTAAAGGAAACTCTTCGCTTGCACCCACCAGCTCCATTTTTCATACCCCACAAGTGTGATGAACCTGTGAACATATCTGGCTTCAAGGTGCCAAAAAATGCACAAGTCTTAGTCAATGTGTGGGCCATGGGAAGAGACCCAACCATATGGAAAAATCCAGATGTATTCATGCCTGAAAGGTTTTTGGAGTGTGGCATTAACTATAAGGGTCATAACTTTGAGCTCATACCCTTTGGGGCAGGCAAAAGGATATGCCCAGGATTGCCTTTGGCTCACAGGTCAGTGCATTTAATAGTGGCNTCCCTTGTACACAACTTTGAATGGAAGCTTGCTGATTGTCTAATGCCAGAACACATGAACATGGAAGAGCAATTTGGGTTAACCTTAAAGAAGATTCAACCTCTTCGAAACCAGTTGCCGCCTCCGCTGCTTGTCGACCACCCCGACGGGGTTGGGCTCAGGGATTCCGCCATGGAAGCCATGAGCTTGCTCCCGATGGCGGAAGGTCCTCTCCCAGTGGTGGCAGAAACCTCCTTCCCCATTTTTCCCAGCGGATGGGAAGATCTGTACGGCTGTTTCCGCCATCGCAGATCCGTGCAGCGTTGTCGACAACGAAGGCTAACGGCTTGCAATCAATGTATAGTGCATCCTGCAATTGATTTTGACTTCTCCTCCACCACCATAGCTTTGCATCCTCTGCTTAATCTCCCCNTGTTCTGTGTTTCCCGCTGCGCCAAGCTTCGCACCACCACAAACATGGTGCTGCTGTTTCACGATCTCGGGGAGATGGAGGAAGTCACGCATGCAGAGGAGGCAGCGGCCAACGATGCCACTTGGCCCAGGCGGAGCGGTGGCAGTGACAGACGAGAACGACCACGATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold07940	1330	3247	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP76C5

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur007940s00043989.1	PF00067.17	p450	2	175	1.10E-55

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.934
SRR1783600	control	0.724
SRR1783602	moderate drought stress	1.165
SRR1811619	moderate drought stress	1.781

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.203
DRR006520	Root Summer glycyrrhizin high producing strain	0.212
DRR006521	Root Winter glycyrrhizin high producing strain	0.745
DRR006522	Root Winter glycyrrhizin high producing strain	0.701
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.489
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.744

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.021
SRR2868004	Drought Stress(Tissue:root)	0.000
SRR2967015	Control (Tissue:root)	0.059

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.957
SRR9715740	Leave	2.624
SRR9715741	Leave	1.800
SRR9715739	Root	0.095
SRR9715742	Root	0.121
SRR9715743	Root	0.119

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.011
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.031

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.884
SRR8400027	Control-Root	0.223