Gene detail information of Glyur008082s00046975.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G33770.1 | 4.00E-59 | Protein kinase superfamily protein |
| NR | XP_004511499.1 | 8.72E-117 | PREDICTED: probable serine/threonine-protein kinase At1g09600-like [Cicer arietinum] |
| COG | YP_007203672.1 | 6.00E-07 | serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658] |
| Swissprot | tr|F4I114|Y1960_ARATH | 2.00E-61 | Probable serine/threonine-protein kinase At1g09600 |
| trEMBL | tr|K7K5C5|K7K5C5_SOYBN | 2.00E-109 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G43771.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08082 | 1121 | 1913 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.5.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur008082s00046975.1 | PF00069.20 | Pkinase | 136 | 226 | 1.40E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.024 |
| SRR1783600 | control | 0.051 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.315 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.507 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.030 |
| SRR2967015 | Control (Tissue:root) | 0.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.551 |
| SRR9715740 | Leave | 0.358 |
| SRR9715741 | Leave | 0.910 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.087 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.473 |
| SRR8749029 | MeJA induced 9h | 0.184 |
| SRR8749030 | Uninduced | 0.740 |
| SRR8749031 | Uninduced | 0.325 |
| SRR8749032 | Uninduced | 0.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.248 |
| SRR8400027 | Control-Root | 0.208 |