Gene detail information of Glyur008210s00045740.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G14780.12.00E-42formate dehydrogenase
NRXP_004489286.11.17E-60PREDICTED: formate dehydrogenase 1, mitochondrial-like [Cicer arietinum]
COGYP_007569483.18.00E-18NAD-dependent formate dehydrogenase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
Swissprottr|Q07511|FDH_SOLTU7.00E-54Formate dehydrogenase, mitochondrial (Precursor)
trEMBLtr|B6VPZ9|B6VPZ9_LOTJA3.00E-60Formate dehydrogenase {ECO:0000313|EMBL:CAR98204.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0821016632868-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00122FDH EC:1.2.1.2 Carbon metabolism map01200
Glyoxylate and dicarboxylate metabolismmap00630
Methane metabolismmap00680


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0051287  NAD binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur008210s00045740.1PF02826.142-Hacid_dh_C1705.20E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.392
SRR1783600control0.455
SRR1783602moderate drought stress0.298
SRR1811619moderate drought stress0.174

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.448
DRR006520Root Summer glycyrrhizin high producing strain0.583
DRR006521Root Winter glycyrrhizin high producing strain1.646
DRR006522Root Winter glycyrrhizin high producing strain1.653
DRR006523Root Summer glycyrrhizin low producing strain0.039
DRR006524Root Summer glycyrrhizin low producing strain0.049
DRR006525Leaf Summer glycyrrhizin high producing strain17.209
DRR006526Leaf Summer glycyrrhizin high producing strain20.921

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.308
SRR2868004Drought Stress(Tissue:root)6.993
SRR2967015Control (Tissue:root)11.488

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.181
SRR9715740Leave2.179
SRR9715741Leave14.499
SRR9715739Root0.252
SRR9715742Root7.381
SRR9715743Root7.702

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.298
SRR8749028MeJA induced 9h53.778
SRR8749029MeJA induced 9h26.540
SRR8749030Uninduced157.969
SRR8749031Uninduced88.855
SRR8749032Uninduced137.977

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.074
SRR8400027Control-Root7.090

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved