Gene detail information of Glyur008244s00047243.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10370.1 | 1.00E-38 | Glutathione S-transferase family protein |
| NR | XP_007157569.1 | 7.41E-58 | hypothetical protein PHAVU_002G080100g [Phaseolus vulgaris] |
| COG | YP_007172684.1 | 3.00E-14 | glutathione S-transferase [Dactylococcopsis salina PCC 8305] |
| Swissprot | tr|Q9FUS8|GSTUH_ARATH | 2.00E-47 | Glutathione S-transferase U17 |
| trEMBL | tr|V7CJN6|V7CJN6_PHAVU | 3.00E-58 | Uncharacterized protein {ECO:0000313|EMBL:ESW29563.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08244 | 366 | 722 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur008244s00047243.1 | PF13417.1 | GST_N_3 | 8 | 78 | 2.40E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.454 |
| SRR1783600 | control | 0.504 |
| SRR1783602 | moderate drought stress | 1.687 |
| SRR1811619 | moderate drought stress | 1.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.313 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.275 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.309 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.155 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 130.182 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 131.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.086 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 9.127 |
| SRR9715740 | Leave | 7.298 |
| SRR9715741 | Leave | 5.776 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.171 |
| SRR9715743 | Root | 0.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.199 |
| SRR8749028 | MeJA induced 9h | 0.282 |
| SRR8749029 | MeJA induced 9h | 0.594 |
| SRR8749030 | Uninduced | 0.178 |
| SRR8749031 | Uninduced | 0.054 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.094 |
| SRR8400027 | Control-Root | 0.035 |