Gene detail information of Glyur008561s00046677.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004504820.1 | 8.35E-31 | PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like [Cicer arietinum] |
| Swissprot | tr|Q0WUA3|MENA_ARATH | 4.00E-10 | 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic (Precursor) |
| trEMBL | tr|G7JCR2|G7JCR2_MEDTR | 9.00E-30 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000313|EMBL:AES90637.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08561 | 1293 | 2173 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K02548 | menA | EC:2.5.1.74 2.5.1.- | Ubiquinone and other terpenoid-quinone biosynthesis | map00130 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.072 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.048 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.211 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.465 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.221 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.672 |
| SRR2967015 | Control (Tissue:root) | 0.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.615 |
| SRR9715740 | Leave | 5.511 |
| SRR9715741 | Leave | 3.550 |
| SRR9715739 | Root | 0.411 |
| SRR9715742 | Root | 0.078 |
| SRR9715743 | Root | 0.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.017 |
| SRR8749028 | MeJA induced 9h | 4.785 |
| SRR8749029 | MeJA induced 9h | 1.526 |
| SRR8749030 | Uninduced | 10.889 |
| SRR8749031 | Uninduced | 2.803 |
| SRR8749032 | Uninduced | 6.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.104 |
| SRR8400027 | Control-Root | 0.097 |