Gene detail information of Glyur008583s00046249.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G79160.1 | 2.00E-21 | |
| NR | XP_004488798.1 | 1.84E-63 | PREDICTED: uncharacterized protein LOC101489878 [Cicer arietinum] |
| trEMBL | tr|A0A072V8W9|A0A072V8W9_MEDTR | 6.00E-62 | YUP8H12R.23 protein, putative {ECO:0000313|EMBL:KEH38252.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08583 | 12 | 1578 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.015 |
| SRR1783600 | control | 2.676 |
| SRR1783602 | moderate drought stress | 3.745 |
| SRR1811619 | moderate drought stress | 2.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.442 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.486 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.213 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.623 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.400 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.069 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.906 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.058 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.825 |
| SRR2967015 | Control (Tissue:root) | 5.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 19.423 |
| SRR9715740 | Leave | 25.797 |
| SRR9715741 | Leave | 47.327 |
| SRR9715739 | Root | 8.250 |
| SRR9715742 | Root | 7.102 |
| SRR9715743 | Root | 7.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.529 |
| SRR8749028 | MeJA induced 9h | 4.103 |
| SRR8749029 | MeJA induced 9h | 2.558 |
| SRR8749030 | Uninduced | 8.601 |
| SRR8749031 | Uninduced | 8.839 |
| SRR8749032 | Uninduced | 5.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.562 |
| SRR8400027 | Control-Root | 8.164 |