Gene detail information of Glyur008667s00047724.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G17220.24.00E-39Protein kinase superfamily protein
NRNP_001234995.15.20E-64protein kinase [Glycine max]
Swissprottr|P27450|CX32_ARATH2.00E-38Probable serine/threonine-protein kinase Cx32, chloroplastic (Precursor)
trEMBLtr|C6ZRS5|C6ZRS5_SOYBN2.00E-64Protein kinase {ECO:0000313|EMBL:ACM89519.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold08667520942+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur008667s00047724.1PF07714.12Pkinase_Tyr91071.30E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.812
SRR1783600control3.223
SRR1783602moderate drought stress4.167
SRR1811619moderate drought stress3.969

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.201
DRR006520Root Summer glycyrrhizin high producing strain9.658
DRR006521Root Winter glycyrrhizin high producing strain4.660
DRR006522Root Winter glycyrrhizin high producing strain5.651
DRR006523Root Summer glycyrrhizin low producing strain24.966
DRR006524Root Summer glycyrrhizin low producing strain25.557
DRR006525Leaf Summer glycyrrhizin high producing strain8.746
DRR006526Leaf Summer glycyrrhizin high producing strain7.481

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.786
SRR2868004Drought Stress(Tissue:root)21.552
SRR2967015Control (Tissue:root)19.546

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.780
SRR9715740Leave9.932
SRR9715741Leave3.927
SRR9715739Root1.232
SRR9715742Root1.923
SRR9715743Root1.078

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.194
SRR8749028MeJA induced 9h10.764
SRR8749029MeJA induced 9h10.913
SRR8749030Uninduced9.870
SRR8749031Uninduced5.264
SRR8749032Uninduced7.578

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.100
SRR8400027Control-Root9.826

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved