Gene detail information of Glyur008682s00045631.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G29380.12.00E-130protein kinase family protein / WD-40 repeat family protein
NRKEH27225.10phosphoinositide 3-kinase regulatory subunit-like protein [Medicago truncatula]
trEMBLtr|A0A072UMY9|A0A072UMY9_MEDTR0Phosphoinositide 3-kinase regulatory subunit-like protein {ECO:0000313|EMBL:KEH27225.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0868292282-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:5.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08333PIK3R4, VPS15 EC:2.7.11.1 Autophagy - animal map04140
Autophagy - yeastmap04138


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005488  binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur008682s00045631.1PF00069.20Pkinase11451.40E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.277
SRR1783600control11.583
SRR1783602moderate drought stress7.067
SRR1811619moderate drought stress6.448

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.119
DRR006520Root Summer glycyrrhizin high producing strain5.192
DRR006521Root Winter glycyrrhizin high producing strain2.696
DRR006522Root Winter glycyrrhizin high producing strain2.397
DRR006523Root Summer glycyrrhizin low producing strain2.136
DRR006524Root Summer glycyrrhizin low producing strain2.968
DRR006525Leaf Summer glycyrrhizin high producing strain2.335
DRR006526Leaf Summer glycyrrhizin high producing strain1.991

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.874
SRR2868004Drought Stress(Tissue:root)12.716
SRR2967015Control (Tissue:root)17.032

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.029
SRR9715740Leave3.427
SRR9715741Leave6.377
SRR9715739Root1.749
SRR9715742Root13.181
SRR9715743Root11.470

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.357
SRR8749028MeJA induced 9h6.922
SRR8749029MeJA induced 9h0.358
SRR8749030Uninduced1.105
SRR8749031Uninduced1.707
SRR8749032Uninduced0.288

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.942
SRR8400027Control-Root33.772

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved