Gene detail information of Glyur008687s00045457.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G29380.13.00E-58protein kinase family protein / WD-40 repeat family protein
NRKEH27225.11.25E-69phosphoinositide 3-kinase regulatory subunit-like protein [Medicago truncatula]
Swissprottr|Q9XF67|PDPK1_ARATH4.00E-063-phosphoinositide-dependent protein kinase 1
trEMBLtr|A0A072UMY9|A0A072UMY9_MEDTR5.00E-70Phosphoinositide 3-kinase regulatory subunit-like protein {ECO:0000313|EMBL:KEH27225.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold086876302346+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:5.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08333PIK3R4, VPS15 EC:2.7.11.1 Autophagy - animal map04140
Autophagy - yeastmap04138


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur008687s00045457.1PF00069.20Pkinase6825.30E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.187
SRR1783600control25.048
SRR1783602moderate drought stress5.654
SRR1811619moderate drought stress5.731

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.069
DRR006520Root Summer glycyrrhizin high producing strain2.373
DRR006521Root Winter glycyrrhizin high producing strain0.903
DRR006522Root Winter glycyrrhizin high producing strain1.497
DRR006523Root Summer glycyrrhizin low producing strain1.644
DRR006524Root Summer glycyrrhizin low producing strain1.245
DRR006525Leaf Summer glycyrrhizin high producing strain1.283
DRR006526Leaf Summer glycyrrhizin high producing strain2.186

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.277
SRR2868004Drought Stress(Tissue:root)3.921
SRR2967015Control (Tissue:root)5.928

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.414
SRR9715740Leave0.871
SRR9715741Leave0.915
SRR9715739Root0.000
SRR9715742Root3.298
SRR9715743Root2.832

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.700
SRR8749028MeJA induced 9h2.779
SRR8749029MeJA induced 9h0.454
SRR8749030Uninduced0.294
SRR8749031Uninduced0.442
SRR8749032Uninduced0.230

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.901
SRR8400027Control-Root12.380

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved