Gene detail information of Glyur008943s00046621.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G63570.12.00E-88glutamate-1-semialdehyde-2,1-aminomutase
NRXP_010545941.11.32E-108PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic [Tarenaya hassleriana]
COGYP_007060176.12.00E-93glutamate-1-semialdehyde-2,1-aminomutase [Synechococcus sp. PCC 6312]
Swissprottr|P45621|GSA_SOYBN2.00E-108Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic (Precursor)
trEMBLtr|G4W9I5|G4W9I5_MEDTR1.00E-108Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:AES74310.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold08943601801-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01845hemL EC:5.4.3.8 Porphyrin and chlorophyll metabolism map00860


Gene Ontology

molecular_function

GO:0003824  catalytic activity

GO:0008483  transaminase activity

GO:0030170  pyridoxal phosphate binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur008943s00046621.1PF00202.16Aminotran_3861962.90E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.756
SRR1783600control0.719
SRR1783602moderate drought stress0.424
SRR1811619moderate drought stress0.385

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.196
DRR006520Root Summer glycyrrhizin high producing strain1.647
DRR006521Root Winter glycyrrhizin high producing strain0.086
DRR006522Root Winter glycyrrhizin high producing strain0.083
DRR006523Root Summer glycyrrhizin low producing strain0.434
DRR006524Root Summer glycyrrhizin low producing strain0.352
DRR006525Leaf Summer glycyrrhizin high producing strain0.210
DRR006526Leaf Summer glycyrrhizin high producing strain0.415

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.242
SRR2868004Drought Stress(Tissue:root)2.745
SRR2967015Control (Tissue:root)4.408

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.000
SRR9715740Leave0.000
SRR9715741Leave0.025
SRR9715739Root0.000
SRR9715742Root0.292
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.110
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.016
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.062

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.357
SRR8400027Control-Root0.234

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved