Gene detail information of Glyur009081s00047706.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23240.1 | 8.00E-34 | ethylene response factor 1 |
| NR | KEH42539.1 | 1.95E-54 | ethylene-responsive transcription factor 1B [Medicago truncatula] |
| Swissprot | tr|Q8LDC8|ERF92_ARATH | 5.00E-41 | Ethylene-responsive transcription factor 1B |
| trEMBL | tr|A0A072VKJ4|A0A072VKJ4_MEDTR | 7.00E-55 | Ethylene-responsive transcription factor 1B {ECO:0000313|EMBL:KEH42539.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09081 | 1638 | 2039 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur009081s00047706.1 | PF00847.15 | AP2 | 1 | 37 | 5.80E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.270 |
| SRR1783600 | control | 0.306 |
| SRR1783602 | moderate drought stress | 0.087 |
| SRR1811619 | moderate drought stress | 0.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.089 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.031 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.225 |
| SRR8749028 | MeJA induced 9h | 0.181 |
| SRR8749029 | MeJA induced 9h | 0.249 |
| SRR8749030 | Uninduced | 0.365 |
| SRR8749031 | Uninduced | 1.172 |
| SRR8749032 | Uninduced | 0.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.074 |
| SRR8400027 | Control-Root | 0.032 |