Gene detail information of Glyur009449s00047252.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36220.13.00E-63ferulic acid 5-hydroxylase 1
NRXP_003615678.12.06E-150Cytochrome P450 [Medicago truncatula]
COGYP_003888859.14.00E-25cytochrome P450 [Cyanothece sp. PCC 7822]
Swissprottr|H2DH18|C7A12_PANGI6.00E-104Cytochrome P450 CYP736A12
trEMBLtr|G7KE92|G7KE92_MEDTR8.00E-151Cytochrome P450 family 71 protein {ECO:0000313|EMBL:AES98636.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold094495021391-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP84A1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur009449s00047252.1PF00067.17p45042615.40E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.737
SRR1783600control22.291
SRR1783602moderate drought stress39.130
SRR1811619moderate drought stress38.312

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain38.594
DRR006520Root Summer glycyrrhizin high producing strain37.817
DRR006521Root Winter glycyrrhizin high producing strain3.743
DRR006522Root Winter glycyrrhizin high producing strain3.610
DRR006523Root Summer glycyrrhizin low producing strain1.922
DRR006524Root Summer glycyrrhizin low producing strain1.549
DRR006525Leaf Summer glycyrrhizin high producing strain5.160
DRR006526Leaf Summer glycyrrhizin high producing strain4.685

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.149
SRR2868004Drought Stress(Tissue:root)28.127
SRR2967015Control (Tissue:root)62.775

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave65.920
SRR9715740Leave5.582
SRR9715741Leave21.091
SRR9715739Root0.341
SRR9715742Root0.723
SRR9715743Root1.031

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.168
SRR8749028MeJA induced 9h2.538
SRR8749029MeJA induced 9h0.787
SRR8749030Uninduced23.382
SRR8749031Uninduced7.462
SRR8749032Uninduced21.324

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root57.017
SRR8400027Control-Root12.743

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved