Gene detail information of Glyur009453s00047220.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G06020.11.00E-60pfkB-like carbohydrate kinase family protein
NRXP_003541157.13.66E-87PREDICTED: fructokinase-2-like [Glycine max]
COGYP_002521328.17.00E-42putative fructokinase [Thermomicrobium roseum DSM 5159]
Swissprottr|P37829|SCRK_SOLTU3.00E-79Fructokinase
trEMBLtr|I1LQD7|I1LQD7_SOYBN1.00E-87Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G05580.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold09453229859+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00847E2.7.1.4, scrK EC:2.7.1.4 Fructose and mannose metabolism map00051
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

molecular_function

GO:0016773  phosphotransferase activity, alcohol group as acceptor



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur009453s00047220.1PF00294.19PfkB141321.60E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control257.919
SRR1783600control260.230
SRR1783602moderate drought stress228.671
SRR1811619moderate drought stress224.237

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain237.090
DRR006520Root Summer glycyrrhizin high producing strain238.067
DRR006521Root Winter glycyrrhizin high producing strain32.322
DRR006522Root Winter glycyrrhizin high producing strain31.331
DRR006523Root Summer glycyrrhizin low producing strain94.942
DRR006524Root Summer glycyrrhizin low producing strain97.837
DRR006525Leaf Summer glycyrrhizin high producing strain12.802
DRR006526Leaf Summer glycyrrhizin high producing strain13.322

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)197.949
SRR2868004Drought Stress(Tissue:root)172.751
SRR2967015Control (Tissue:root)227.995

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.731
SRR9715740Leave36.839
SRR9715741Leave20.806
SRR9715739Root461.119
SRR9715742Root373.211
SRR9715743Root365.231

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h192.416
SRR8749028MeJA induced 9h131.651
SRR8749029MeJA induced 9h209.241
SRR8749030Uninduced5.475
SRR8749031Uninduced4.395
SRR8749032Uninduced89.738

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root490.397
SRR8400027Control-Root434.423

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved