Gene detail information of Glyur009531s00047941.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G34880.12.00E-40Amidase family protein
NRXP_004505809.11.12E-62PREDICTED: putative amidase C869.01-like [Cicer arietinum]
COGYP_002772027.18.00E-20amidase [Brevibacillus brevis NBRC 100599]
trEMBLtr|A0A072ULF6|A0A072ULF6_MEDTR7.00E-61Amidase C869.01-like protein, putative {ECO:0000313|EMBL:KEH30532.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold095313389+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01426E3.5.1.4, amiE EC:3.5.1.4 Arginine and proline metabolism map00330
Phenylalanine metabolismmap00360
Tryptophan metabolismmap00380
Aminobenzoate degradationmap00627
Styrene degradationmap00643


Gene Ontology

molecular_function

GO:0016884  carbon-nitrogen ligase activity, with glutamine as amido-N-donor



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.788
SRR1783600control2.811
SRR1783602moderate drought stress0.913
SRR1811619moderate drought stress1.076

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.280
DRR006520Root Summer glycyrrhizin high producing strain0.550
DRR006521Root Winter glycyrrhizin high producing strain12.685
DRR006522Root Winter glycyrrhizin high producing strain12.897
DRR006523Root Summer glycyrrhizin low producing strain0.723
DRR006524Root Summer glycyrrhizin low producing strain0.996
DRR006525Leaf Summer glycyrrhizin high producing strain1.416
DRR006526Leaf Summer glycyrrhizin high producing strain1.834

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.641
SRR2868004Drought Stress(Tissue:root)20.546
SRR2967015Control (Tissue:root)13.762

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.090
SRR9715740Leave3.792
SRR9715741Leave12.137
SRR9715739Root0.695
SRR9715742Root5.275
SRR9715743Root3.837

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.805
SRR8749028MeJA induced 9h35.898
SRR8749029MeJA induced 9h63.864
SRR8749030Uninduced204.440
SRR8749031Uninduced119.290
SRR8749032Uninduced250.281

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.213
SRR8400027Control-Root4.201

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved