Gene detail information of Glyur009619s00044839.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G79460.1 | 2.00E-15 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
| NR | XP_004488548.1 | 1.91E-21 | PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Cicer arietinum] |
| Swissprot | tr|Q39548|KSB_CUCMA | 3.00E-17 | Ent-kaur-16-ene synthase, chloroplastic (Precursor) |
| trEMBL | tr|H9TB20|H9TB20_MALDO | 6.00E-21 | Ent-kaurene synthase {ECO:0000313|EMBL:AFG18184.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09619 | 286 | 1233 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K04121 | E4.2.3.19 | EC:4.2.3.19 | Diterpenoid biosynthesis | map00904 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.053 |
| SRR1783600 | control | 0.917 |
| SRR1783602 | moderate drought stress | 1.770 |
| SRR1811619 | moderate drought stress | 1.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.668 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.157 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.791 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.259 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.699 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.139 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.450 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.463 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.541 |
| SRR2967015 | Control (Tissue:root) | 0.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.756 |
| SRR9715740 | Leave | 1.181 |
| SRR9715741 | Leave | 0.631 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.185 |
| SRR9715743 | Root | 0.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.869 |
| SRR8749028 | MeJA induced 9h | 1.404 |
| SRR8749029 | MeJA induced 9h | 0.642 |
| SRR8749030 | Uninduced | 0.045 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.335 |
| SRR8400027 | Control-Root | 0.541 |