Gene detail information of Glyur009669s00046636.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G21105.3 | 3.00E-50 | Plant L-ascorbate oxidase |
| NR | AFK45201.1 | 1.42E-82 | unknown [Lotus japonicus] |
| COG | YP_001358116.1 | 3.00E-16 | copper resistance protein A [Sulfurovum sp. NBC37-1] |
| Swissprot | tr|P24792|ASO_CUCMA | 3.00E-69 | L-ascorbate oxidase (Precursor) |
| trEMBL | tr|I3SY59|I3SY59_LOTJA | 5.00E-83 | Uncharacterized protein {ECO:0000313|EMBL:AFK45201.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09669 | 168 | 1463 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00423 | E1.10.3.3 | EC:1.10.3.3 | Ascorbate and aldarate metabolism | map00053 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur009669s00046636.1 | PF07732.10 | Cu-oxidase_3 | 13 | 103 | 7.30E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.218 |
| SRR1783600 | control | 0.429 |
| SRR1783602 | moderate drought stress | 1.966 |
| SRR1811619 | moderate drought stress | 1.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.042 |
| SRR2967015 | Control (Tissue:root) | 0.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.430 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.231 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.636 |
| SRR9715743 | Root | 0.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 35.867 |
| SRR8400027 | Control-Root | 0.000 |