Gene detail information of Glyur009887s00046132.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G01070.1 | 3.00E-73 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_006434938.1 | 2.09E-149 | hypothetical protein CICLE_v10001016mg [Citrus clementina] |
| Swissprot | tr|Q40287|UFOG5_MANES | 5.00E-111 | Anthocyanidin 3-O-glucosyltransferase 5 |
| trEMBL | tr|V4SKD8|V4SKD8_9ROSI | 8.00E-150 | Uncharacterized protein {ECO:0000313|EMBL:ESR48178.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09887 | 3 | 1064 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur009887s00046132.1 | PF00201.13 | UDPGT | 134 | 312 | 1.70E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.274 |
| SRR1783600 | control | 0.311 |
| SRR1783602 | moderate drought stress | 0.162 |
| SRR1811619 | moderate drought stress | 0.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.766 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.656 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.934 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.041 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.044 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.596 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.095 |
| SRR2967015 | Control (Tissue:root) | 8.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.016 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.905 |
| SRR9715742 | Root | 1.309 |
| SRR9715743 | Root | 1.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.214 |
| SRR8400027 | Control-Root | 3.482 |