Gene detail information of Glyur009954s00045650.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24100.1 | 1.00E-39 | Protein kinase superfamily protein |
| NR | KEH42901.1 | 3.03E-50 | Serine/Threonine kinase family protein [Medicago truncatula] |
| Swissprot | tr|O23304|BLUS1_ARATH | 2.00E-21 | Serine/threonine-protein kinase BLUS1 |
| trEMBL | tr|A0A072VMS5|A0A072VMS5_MEDTR | 1.00E-50 | Serine/Threonine kinase family protein {ECO:0000313|EMBL:KEH42901.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09954 | 828 | 1274 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.1.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur009954s00045650.1 | PF00069.20 | Pkinase | 17 | 97 | 1.10E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.158 |
| SRR1783600 | control | 1.138 |
| SRR1783602 | moderate drought stress | 0.900 |
| SRR1811619 | moderate drought stress | 0.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.728 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.320 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.802 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.888 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.315 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.177 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.310 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.091 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.637 |
| SRR2967015 | Control (Tissue:root) | 6.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.317 |
| SRR8749028 | MeJA induced 9h | 8.715 |
| SRR8749029 | MeJA induced 9h | 9.062 |
| SRR8749030 | Uninduced | 17.133 |
| SRR8749031 | Uninduced | 21.952 |
| SRR8749032 | Uninduced | 13.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.219 |
| SRR8400027 | Control-Root | 0.000 |