Gene detail information of Glyur010699s00045018.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66530.12.00E-30Arginyl-tRNA synthetase, class Ic
NRXP_004513062.11.22E-45PREDICTED: arginine--tRNA ligase, cytoplasmic-like isoform X2 [Cicer arietinum]
COGYP_005091190.16.00E-07arginyl-tRNA synthetase [Oceanimonas sp. GK1]
trEMBLtr|I1J4G6|I1J4G6_SOYBN3.00E-43Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G00940.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold1069921459-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01887RARS, argS EC:6.1.1.19 Aminoacyl-tRNA biosynthesis map00970


Gene Ontology

biological_process

GO:0006420  arginyl-tRNA aminoacylation


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0000166  nucleotide binding

GO:0004814  arginine-tRNA ligase activity

GO:0005524  ATP binding

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur010699s00045018.1PF03485.11Arg_tRNA_synt_N15497.20E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.502
SRR1783600control5.251
SRR1783602moderate drought stress8.496
SRR1811619moderate drought stress8.707

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.967
DRR006520Root Summer glycyrrhizin high producing strain9.485
DRR006521Root Winter glycyrrhizin high producing strain12.498
DRR006522Root Winter glycyrrhizin high producing strain12.454
DRR006523Root Summer glycyrrhizin low producing strain9.326
DRR006524Root Summer glycyrrhizin low producing strain8.608
DRR006525Leaf Summer glycyrrhizin high producing strain8.423
DRR006526Leaf Summer glycyrrhizin high producing strain9.347

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.011
SRR2868004Drought Stress(Tissue:root)0.012
SRR2967015Control (Tissue:root)0.000

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.653
SRR9715740Leave0.651
SRR9715741Leave1.203
SRR9715739Root1.013
SRR9715742Root0.567
SRR9715743Root1.090

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.505
SRR8749028MeJA induced 9h13.367
SRR8749029MeJA induced 9h12.077
SRR8749030Uninduced26.746
SRR8749031Uninduced13.448
SRR8749032Uninduced24.490

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.907
SRR8400027Control-Root2.110

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved