Gene detail information of Glyur011004s00045734.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G42250.11.00E-34Zinc-binding alcohol dehydrogenase family protein
NRAFK42017.13.87E-125unknown [Lotus japonicus]
COGYP_006372881.18.00E-45alcohol dehydrogenase class III [Tistrella mobilis KA081020-065]
Swissprottr|Q9FH04|ADHL7_ARATH7.00E-51Alcohol dehydrogenase-like 7
trEMBLtr|I3SP25|I3SP25_LOTJA1.00E-125Uncharacterized protein {ECO:0000313|EMBL:AFK42017.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold110041141354-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00121frmA, ADH5, adhC EC:1.1.1.284 1.1.1.1 Carbon metabolism map01200
Degradation of aromatic compoundsmap01220
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Fatty acid degradationmap00071
Tyrosine metabolismmap00350
Retinol metabolismmap00830
Chloroalkane and chloroalkene degradationmap00625
Naphthalene degradationmap00626
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur011004s00045734.1PF00107.21ADH_zinc_N1092214.40E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.122
SRR1783600control0.049
SRR1783602moderate drought stress0.781
SRR1811619moderate drought stress0.503

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.072
DRR006523Root Summer glycyrrhizin low producing strain0.147
DRR006524Root Summer glycyrrhizin low producing strain0.073
DRR006525Leaf Summer glycyrrhizin high producing strain0.390
DRR006526Leaf Summer glycyrrhizin high producing strain0.539

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.513
SRR2868004Drought Stress(Tissue:root)5.401
SRR2967015Control (Tissue:root)2.536

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.854
SRR9715740Leave3.625
SRR9715741Leave1.821
SRR9715739Root0.000
SRR9715742Root0.000
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.955
SRR8749028MeJA induced 9h26.163
SRR8749029MeJA induced 9h49.764
SRR8749030Uninduced44.799
SRR8749031Uninduced441.655
SRR8749032Uninduced192.864

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.527
SRR8400027Control-Root0.740

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved