Gene detail information of Glyur012409s00046163.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007135415.1 | 2.94E-31 | hypothetical protein PHAVU_010G127400g [Phaseolus vulgaris] |
| trEMBL | tr|V7APA3|V7APA3_PHAVU | 1.00E-31 | Uncharacterized protein {ECO:0000313|EMBL:ESW07409.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold12409 | 30 | 781 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Tify |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur012409s00046163.1 | PF06200.9 | tify | 74 | 102 | 2.20E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.944 |
| SRR1783600 | control | 12.513 |
| SRR1783602 | moderate drought stress | 8.235 |
| SRR1811619 | moderate drought stress | 8.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.346 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.366 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.085 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.010 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.903 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.570 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.510 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.420 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.098 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.041 |
| SRR2967015 | Control (Tissue:root) | 3.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.306 |
| SRR9715740 | Leave | 3.607 |
| SRR9715741 | Leave | 2.481 |
| SRR9715739 | Root | 2.692 |
| SRR9715742 | Root | 2.711 |
| SRR9715743 | Root | 3.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.343 |
| SRR8749028 | MeJA induced 9h | 1.182 |
| SRR8749029 | MeJA induced 9h | 0.776 |
| SRR8749030 | Uninduced | 8.879 |
| SRR8749031 | Uninduced | 28.137 |
| SRR8749032 | Uninduced | 4.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.651 |
| SRR8400027 | Control-Root | 14.032 |