Detail information of GWHGAAEX003630/evm.TU.scaffold_139.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15901175|ref|NP_345779.1|7.00E-09V-type ATP synthase subunit K [Streptococcus pneumoniae TIGR4]
KOGKOG02321.00E-108Vacuolar H+-ATPase V0 sector, subunits c/c'
nrgi|743828717|ref|XP_010933937.1|5.27E-108PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit-like [Elaeis guineensis]
Swissprottr|P59229|VATL4_ARATH4.00E-109V-type proton ATPase subunit c4
trEMBLtr|B3TLT5|B3TLT5_ELAGV2.00E-108Vacuolar H+-ATP synthase 16kDa proteolipid subunit {ECO:0000313|EMBL:ACF06516.1}
TAIRAT1G756301.00E-108vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000135947027953933+
Transcript Sequence

Network for GWHGAAEX003630

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00137.20ATP-synt_C16755.70E-14
PF00137.20ATP-synt_C961542.90E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02155ATPeV0C, ATP6L Metabolic pathways map01100
Oxidative phosphorylationmap00190
Phagosomemap04145
Lysosomemap04142
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:1902600Biological Processhydrogen ion transmembrane transport
GO:0015078Molecular Functionhydrogen ion transmembrane transporter activity
GO:0033177Cellular Componentproton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179Cellular Componentproton-transporting V-type ATPase, V0 domain

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms105.900
SRR2545915Juvenile tuber131.730
SRP108465SRR5643513five period of Gastrodia elata213.770
SRR5643514five period of Gastrodia elata230.750
SRR5643515five period of Gastrodia elata201.420
SRR5643524five period of Gastrodia elata227.420
SRR5643525five period of Gastrodia elata212.060
SRR5643528five period of Gastrodia elata195.360
SRR5643658five period of Gastrodia elata178.780
SRR5643659five period of Gastrodia elata223.450
SRR5643660five period of Gastrodia elata228.970
SRR5643661five period of Gastrodia elata254.150
SRR5643662five period of Gastrodia elata224.330
SRR5643663five period of Gastrodia elata224.530
SRR5643664five period of Gastrodia elata214.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1229.420
SRR6049655Rhizomagastrodiae_C368-T10_good_1235.800
SRR6049656Rhizomagastrodiae_C368-T07_good_1252.330
SRR6049657Rhizomagastrodiae_C368-T07_good_1182.520
SRR6049658Rhizomagastrodiae_C368-T04_good_1180.310
SRR6049659Rhizomagastrodiae_C368-T04_good_1156.300
SRR6049660Rhizomagastrodiae_C368-T01_good_1197.470
SRR6049661Rhizomagastrodiae_C368-T04_good_1183.340
SRR6049662Rhizomagastrodiae_C368-T01_good_1358.070
SRR6049663Rhizomagastrodiae_C368-T01_good_1288.960
SRR6049664Rhizomagastrodiae_C368-T10_good_1397.220
SRR6049665Rhizomagastrodiae_C368-T10_good_1397.220
SRP279888GastroGastrodia elata tuber 252.11
JuvenJuvenile tuber217.89
Mother_GastroMother tuber of Gastrodia elata 281.60
Mother_JuvenMother tuber of Juvenile 204.78