Detail information of GWHGAAEX004379/evm.TU.scaffold_149.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695055386|ref|XP_009415868.1|6.28E-72PREDICTED: uncharacterized protein LOC103996641 [Musa acuminata subsp. malaccensis]
trEMBLtr|W1PER2|W1PER2_AMBTC8.00E-69Uncharacterized protein {ECO:0000313|EMBL:ERN06164.1}
TAIRAT5G131908.00E-54Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000146514796528158-
Transcript Sequence

Network for GWHGAAEX004379

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10601.8zf-LITAF-like721361.60E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19363LITAF Lysosome map04142

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.580
SRR2545915Juvenile tuber33.360
SRP108465SRR5643513five period of Gastrodia elata55.600
SRR5643514five period of Gastrodia elata39.480
SRR5643515five period of Gastrodia elata57.930
SRR5643524five period of Gastrodia elata41.790
SRR5643525five period of Gastrodia elata65.660
SRR5643528five period of Gastrodia elata52.260
SRR5643658five period of Gastrodia elata42.980
SRR5643659five period of Gastrodia elata48.110
SRR5643660five period of Gastrodia elata48.800
SRR5643661five period of Gastrodia elata46.470
SRR5643662five period of Gastrodia elata57.510
SRR5643663five period of Gastrodia elata49.190
SRR5643664five period of Gastrodia elata57.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_144.450
SRR6049655Rhizomagastrodiae_C368-T10_good_137.460
SRR6049656Rhizomagastrodiae_C368-T07_good_139.300
SRR6049657Rhizomagastrodiae_C368-T07_good_134.270
SRR6049658Rhizomagastrodiae_C368-T04_good_140.410
SRR6049659Rhizomagastrodiae_C368-T04_good_135.070
SRR6049660Rhizomagastrodiae_C368-T01_good_138.870
SRR6049661Rhizomagastrodiae_C368-T04_good_141.090
SRR6049662Rhizomagastrodiae_C368-T01_good_144.910
SRR6049663Rhizomagastrodiae_C368-T01_good_148.960
SRR6049664Rhizomagastrodiae_C368-T10_good_152.270
SRR6049665Rhizomagastrodiae_C368-T10_good_152.270
SRP279888GastroGastrodia elata tuber 52.93
JuvenJuvenile tuber48.69
Mother_GastroMother tuber of Gastrodia elata 79.95
Mother_JuvenMother tuber of Juvenile 61.73