Detail information of GWHGAAEX006085/evm.TU.scaffold_177.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15901175|ref|NP_345779.1|6.00E-09V-type ATP synthase subunit K [Streptococcus pneumoniae TIGR4]
KOGKOG02328.00E-108Vacuolar H+-ATPase V0 sector, subunits c/c'
nrgi|6164957|gb|AAF04597.1|AF193814_16.34E-108vacuolar H+-ATP synthase 16kDa proteolipid subunit [Dendrobium crumenatum]
Swissprottr|O22552|VATL_VIGRR1.00E-108V-type proton ATPase 16 kDa proteolipid subunit
trEMBLtr|Q9SE27|Q9SE27_DENCR2.00E-108Vacuolar H+-ATP synthase 16kDa proteolipid subunit {ECO:0000313|EMBL:AAF04597.1}
TAIRAT1G756308.00E-108vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018511383281141557-
Transcript Sequence

Network for GWHGAAEX006085

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00137.20ATP-synt_C16755.70E-14
PF00137.20ATP-synt_C961542.90E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02155ATPeV0C, ATP6L Metabolic pathways map01100
Oxidative phosphorylationmap00190
Phagosomemap04145
Lysosomemap04142
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:1902600Biological Processhydrogen ion transmembrane transport
GO:0015078Molecular Functionhydrogen ion transmembrane transporter activity
GO:0033179Cellular Componentproton-transporting V-type ATPase, V0 domain
GO:0033177Cellular Componentproton-transporting two-sector ATPase complex, proton-transporting domain

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.100
SRR2545915Juvenile tuber71.990
SRP108465SRR5643513five period of Gastrodia elata202.450
SRR5643514five period of Gastrodia elata163.520
SRR5643515five period of Gastrodia elata164.880
SRR5643524five period of Gastrodia elata158.560
SRR5643525five period of Gastrodia elata173.200
SRR5643528five period of Gastrodia elata171.510
SRR5643658five period of Gastrodia elata147.300
SRR5643659five period of Gastrodia elata130.380
SRR5643660five period of Gastrodia elata120.200
SRR5643661five period of Gastrodia elata138.310
SRR5643662five period of Gastrodia elata103.970
SRR5643663five period of Gastrodia elata106.760
SRR5643664five period of Gastrodia elata108.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1155.660
SRR6049655Rhizomagastrodiae_C368-T10_good_1255.710
SRR6049656Rhizomagastrodiae_C368-T07_good_1176.530
SRR6049657Rhizomagastrodiae_C368-T07_good_1140.420
SRR6049658Rhizomagastrodiae_C368-T04_good_1143.610
SRR6049659Rhizomagastrodiae_C368-T04_good_1123.490
SRR6049660Rhizomagastrodiae_C368-T01_good_1128.580
SRR6049661Rhizomagastrodiae_C368-T04_good_1159.520
SRR6049662Rhizomagastrodiae_C368-T01_good_1213.750
SRR6049663Rhizomagastrodiae_C368-T01_good_1166.890
SRR6049664Rhizomagastrodiae_C368-T10_good_1214.290
SRR6049665Rhizomagastrodiae_C368-T10_good_1214.290
SRP279888GastroGastrodia elata tuber 166.99
JuvenJuvenile tuber99.55
Mother_GastroMother tuber of Gastrodia elata 258.23
Mother_JuvenMother tuber of Juvenile 202.66