Detail information of GWHGAAEX007939/evm.TU.scaffold_208.32
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|383452460|ref|YP_005366449.1| | 2.00E-08 | alpha/beta fold family hydrolase [Corallococcus coralloides DSM 2259] |
| KOG | KOG2624 | 4.00E-133 | Triglyceride lipase-cholesterol esterase |
| nr | gi|694996846|ref|XP_009396340.1| | 0 | PREDICTED: triacylglycerol lipase 1 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q71DJ5|LIP1_ARATH | 8.00E-169 | Triacylglycerol lipase 1 (Precursor) |
| trEMBL | tr|M0RYI2|M0RYI2_MUSAM | 0 | Lipase {ECO:0000256|PIRNR:PIRNR000862} |
| TAIR | AT2G15230 | 4.00E-133 | lipase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000209 | 705345 | 728634 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007939
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04083.15 | Abhydro_lipase | 46 | 102 | 9.70E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01052 | LIPA | Steroid biosynthesis | map00100 |
| Lysosome | map04142 | ||
| Cholesterol metabolism | map04979 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006629 | Biological Process | lipid metabolic process |
| GO:0016788 | Molecular Function | hydrolase activity, acting on ester bonds |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 43.780 |
| SRR2545915 | Juvenile tuber | 23.850 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.360 |
| SRR5643514 | five period of Gastrodia elata | 18.640 | |
| SRR5643515 | five period of Gastrodia elata | 15.560 | |
| SRR5643524 | five period of Gastrodia elata | 17.380 | |
| SRR5643525 | five period of Gastrodia elata | 46.930 | |
| SRR5643528 | five period of Gastrodia elata | 38.550 | |
| SRR5643658 | five period of Gastrodia elata | 47.200 | |
| SRR5643659 | five period of Gastrodia elata | 14.400 | |
| SRR5643660 | five period of Gastrodia elata | 15.460 | |
| SRR5643661 | five period of Gastrodia elata | 13.510 | |
| SRR5643662 | five period of Gastrodia elata | 12.580 | |
| SRR5643663 | five period of Gastrodia elata | 14.310 | |
| SRR5643664 | five period of Gastrodia elata | 17.830 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.490 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 22.170 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.290 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.890 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 17.050 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 23.740 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 19.650 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 16.050 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.280 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.600 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 15.070 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 15.070 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 16.17 |
| Juven | Juvenile tuber | 26.34 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 28.92 | |
| Mother_Juven | Mother tuber of Juvenile | 25.28 |